Transform your breakfast or snack routine with these incredible homemade bagel bites, perfected in the air fryer! Stuffed with luscious cream cheese and requiring only two simple ingredients, this recipe lets you create crispy, chewy copycat Bantam bagels right in your kitchen. Forget expensive coffee shop treats; our easy method uses self-rising flour and Greek yogurt to deliver perfectly golden, bite-sized delights that are soft on the inside and delightfully crisp on the outside. Get ready to indulge in these irresistible air fryer wonders!

Are you ready to dive into the world of delicious, cream cheese-stuffed bagel bites? While you can certainly make full-sized bagels with this versatile two-ingredient dough, transforming them into smaller “bites” makes them infinitely more fun to eat and incredibly easy to fill with your favorite spreads. Whether you prefer sweet jam, rich peanut butter, or the classic tangy cream cheese, these air fryer bagel bites are a true game-changer. They’ve quickly become one of our go-to air fryer recipes, especially for a quick and satisfying breakfast or a delightful on-the-go snack.
These mini bagels aren’t just delicious; they’re also a smart choice! Often approved for Weight Watchers, they allow you to enjoy a guilt-free treat. The beauty of this recipe is its adaptability to any brand of air fryer. However, if you’re like us, you might be obsessed with a multi-functional appliance like the Ninja Foodi, which expertly combines an air fryer with a pressure cooker. We’ve found it delivers exceptional results for these bagel bites, consistently achieving that perfect crispy exterior and wonderfully soft interior.
Our journey began with crafting whole 2-ingredient bagels, which were surprisingly easy and incredibly tasty. Yet, our frequent trips to Starbucks for Bantam bagels became quite expensive. This inspired us to recreate that same magic at home, and the results were even better than we hoped! Not only are these homemade versions significantly cheaper, but they also offer endless customization. Imagine cream cheese-stuffed bagels with your favorite jam, peanut butter, or even savory fillings – the possibilities are truly limitless.
The Genius of 2-Ingredient Bagel Dough
The secret behind these effortlessly delicious bagel bites lies in the simplicity of our two-ingredient dough. This popular baking hack combines self-rising flour and Greek yogurt to create a versatile dough that requires no yeast, no waiting for proofing, and minimal effort. The acidity in the Greek yogurt reacts with the leavening agents in the self-rising flour, resulting in a light, airy, and wonderfully chewy texture that perfectly mimics traditional bagels. This simple combination eliminates complex steps, making homemade bagels accessible to even the most novice bakers. It’s truly a game-changer for anyone craving fresh, warm bagels without the fuss.
Why the Air Fryer is Your Best Friend for Bagels
While you could bake these delightful bites in a conventional oven, the air fryer truly elevates them to another level. The circulating hot air creates an unparalleled crispy outer crust while keeping the inside perfectly soft and chewy—a texture that’s notoriously difficult to achieve in a standard oven without a lot of effort. If you’ve ever bought frozen Bantam bagels, you might have tried a similar two-step process: microwave to defrost, then crisp in a toaster oven or air fryer. With our homemade version, we go from start to finish in the air fryer, ensuring optimal texture and flavor. This appliance is fantastic for many Ninja Foodi recipes or other popular models like the Cosori, providing consistent, golden results every time.
Essential Air Fryer Tips for Perfection:
- Preheat is Key: For the crispiest results, always preheat your air fryer before adding your food. This ensures even cooking and that coveted golden-brown finish. Learning how to preheat your air fryer properly is a small step that makes a big difference.
- Don’t Overcrowd: Cook in a single layer to allow hot air to circulate freely around each bagel bite. This prevents steaming and ensures maximum crispiness.
- Check Your Chart: For best results across various foods, keep a printable free air fryer cooking time chart handy for quick reference on your fridge.

For those who, like us, became enamored with the idea of Bantam bagels after seeing them on Shark Tank, you’ll be astonished at how straightforward they are to make from scratch. Not only are they far more economical, but they also offer endless possibilities for customization. Whether you’re craving classic stuffed bagels with cream cheese, a sweet treat filled with jam, or a protein-packed snack with peanut butter, you’re in control.
While this recipe focuses on making fresh, homemade bagel bites, we also understand the convenience of frozen options. If you have frozen bagel bites and simply want to warm them up, here are the instructions:

Ingredient Notes for Perfect Bagel Bites
Crafting these delicious bagel bites requires minimal ingredients and allows for plenty of customization:
- Self-Rising Flour: This is the foundation of our two-ingredient dough. It already contains baking powder and salt, which provide the lift and flavor needed. If you don’t have self-rising flour, you can easily make your own by combining 1 cup of all-purpose flour with 1.5 teaspoons of baking powder and 1/4 teaspoon of salt.
- Greek Yogurt: Plain, full-fat Greek yogurt is highly recommended for the best texture and richness. Its thick consistency and acidity are crucial for activating the leavening in the flour. While plain is versatile, don’t hesitate to experiment with flavored Greek yogurts like vanilla or blueberry, as we sometimes do, for a sweeter bagel bite.
- Cream Cheese Filling: For easy stuffing, whipped cream cheese is ideal due to its softer consistency. However, softened block cream cheese also works well.
- Optional Toppings:
- Everything Bagel Seasoning: For a savory classic.
- Cinnamon Sugar: A delightful choice for a sweeter bite, especially with blueberry or vanilla yogurt dough.
- Egg Wash: A simple egg wash (one egg beaten with a tablespoon of water) brushed over the dough before air frying helps achieve a beautiful golden crust and makes toppings stick better.
Tips for Success and Delicious Variations
To ensure your homemade bagel bites turn out perfectly every time, keep these tips in mind:
- Flavor Variations: If you prefer a savory bagel bite, stick to plain Greek yogurt and top with an egg wash and everything bagel seasoning. For a sweeter version, blueberry or vanilla Greek yogurt works wonderfully, especially when topped with cinnamon sugar.
- No Stick Solutions: While parchment paper can be used in your air fryer basket, we’ve found that a light spray of non-stick cooking spray on the springform pan or directly in the basket is usually sufficient to prevent sticking.
- Size Matters: The cooking time will vary depending on whether you’re making small bagel bites or larger, whole bagels. Our recipe card provides timings for both, but the photos you see showcase our delightful homemade cream cheese stuffed bagel bites.
- Filling After Cooling: It’s crucial to wait until your bagel bites have cooled completely before adding the cream cheese filling. This prevents the cream cheese from melting and oozing out.
- Easy Filling Technique: For a professional touch, use a pastry bag fitted with a small, sturdy tip. Fill it with whipped cream cheese and carefully squeeze it into a small hole made on the side of each cooled bagel bite with a small knife.


How to Effortlessly Fill Your Bagel Bites with Cream Cheese
Filling these small delights with cream cheese can seem tricky, but with the right approach, it’s quite simple. While a pastry bag with a hard tip offers the cleanest and most effective method, you can easily improvise with common kitchen items.
Once your bagel bites have come out of the air fryer and cooled completely on a paper towel, it’s time for the fun part. Using a very small, sharp knife, carefully make a small incision or hole on the side of each bagel bite. This will be your entry point for the filling.
If you don’t have a pastry bag, a freezer baggie works perfectly! Spoon your whipped cream cheese into one corner of the baggie. Gently push all the air out of the bag and seal it tightly. Then, snip off a tiny corner of the bag with scissors – start small, you can always make the opening larger if needed. Insert the snipped corner of the baggie into the hole you made in the bagel bite and gently squeeze. You’ll feel the cream cheese filling the center. Continue squeezing until you see the cream cheese just begin to peek back out of the hole, indicating it’s thoroughly stuffed. Repeat this process for all your bagel bites, and get ready to enjoy a burst of creamy flavor with every bite!

Bagel Bites Air Fryer Recipe
By Justine
This 2-ingredient bagel bites air fryer recipe, perfect for your Ninja Foodi or Cosori, yields crispy exteriors with soft, chewy, cream cheese-stuffed centers—just like copycat Bantam bagels.
- Prep Time: 15 mins
- Cook Time: 9 mins
- Total Time: 24 mins
- Servings: 4
Equipment
- 1 Bowl
- 1 Air Fryer
- 1 7 inch springform pan (recommended for forming)
Ingredients
- 1 cup self-rising flour
- 1 cup Greek yogurt (plain or flavored)
Instructions
- In a bowl, mix together your self-rising flour and Greek yogurt until a cohesive dough forms.
- Prepare your air fryer basket or pan. If using a springform pan (recommended for shaping), spray the inside with non-stick spray. Alternatively, you can place parchment paper directly in the air fryer basket.
- Divide the dough into equal-sized balls, about a heaping tablespoon each. Place them into your prepared pan or basket, ensuring there’s space between each one. A 7-inch pan comfortably fits about 7 bagel bites.
- At this point, you can sprinkle your bagel bites with your desired topping: a mixture of equal parts cinnamon and sugar for a sweet touch, or everything bagel seasoning for a savory flavor.
- Close your air fryer lid (if using a Ninja Foodi with an attached lid) and set the temperature to 325°F. Air fry for 5 minutes for bagel bites, or 9 minutes if you’ve opted to make 3 whole bagels.
- Carefully lift the lid and flip each bagel bite over. If desired, you can sprinkle them with more cinnamon and sugar or seasoning.
- Return them to the air fryer and set to air crisp at 325°F for an additional 4 minutes (for bagel bites), or 6 minutes (for whole bagels).
- Remove the bagel bites from the pan and set them aside to cool completely on a wire rack before filling them.
- Once cooled, use a small knife to make a small incision on the side of each bagel bite. Fill a pastry bag (or a freezer baggie with the tip snipped off) with whipped cream cheese and squeeze into the hole until the bagel bite is generously stuffed.
Video
Watch our video tutorial to see how easy it is to make these delicious bagel bites!
Notes
Ninja Foodi Bagel Bites Specific Instructions:
- Follow the same instructions above to prepare the dough.
- Use the lid that is attached to your Ninja Foodi for air frying.
- Preheat your Ninja Foodi for 5 minutes before adding the dough balls.
- Place the basket with the bagel dough balls inside the preheated Ninja Foodi.
- Close the attached lid.
- Follow the temperature and timing listed in the main instructions above for perfect results.
Nutrition information is automatically calculated, so should only be used as an approximation.
Additional Info
- Course: Breakfast, Snack
- Cuisine: American
Tried this recipe? Mention @thetypical_mom or tag #thetypicalmom!
How to Cook Frozen Bagel Bites in the Air Fryer
Sometimes you need a quick fix, and frozen bagel bites (like those from Bantam Bagels or Trader Joe’s) are perfect for that. The air fryer makes them delightfully crispy in minutes:
- Preheat your air fryer for 3 minutes at 360 degrees F.
- Arrange the frozen bagel bites in a single layer in the air fryer basket.
- Cook for 6 minutes. There’s no need to flip them!
- Enjoy your perfectly crispy, ready-to-eat frozen bagel bites!
FAQ: Your Air Fryer Bagel Questions Answered
How to air fry a frozen bagel?
In a hurry and need to know how to cook a frozen bagel to tender and golden brown perfection? The air fryer is your best friend! Simply place the frozen bagel directly into the air fryer and set it to 400°F for 8 minutes. For an extra crispy interior, slice the bagel in half (if not pre-sliced), butter each cut side, and place them cut-side up in the air fryer for an additional minute to achieve a beautiful golden toast.
How long do you put a bagel in the air fryer?
The cooking time for a fresh bagel in the air fryer depends on your preferred texture. For a quick and extra crispy result, set your air fryer to 400°F. If you prefer a chewier texture, a slightly lower temperature and longer cooking time will work. A good starting point is to slice your bagel in half and air fry at 370°F for about 3 minutes. Remove, spread some butter on each side, and place them back into the air fryer basket to toast for 3 more minutes. This method yields a wonderfully crispy bagel, much like using a toaster oven.
For a fantastic accompaniment to these bagel bites, consider making our breakfast bundt cake—it’s absolutely delicious! The total time to get these bagel bites crispy is approximately 15 minutes. And don’t forget, whether you’re cooking frozen treats or fresh dough in your machine, our air fryer cooking times chart (linked above) is an invaluable resource to ensure everything is cooked perfectly.
Looking for more amazing air fryer recipes? You’ll love our Air fryer sticky buns made with crescent rolls, and our air fryer pretzel bites make for another fun and easy snack!


